Publications from the Department of Computer Science, Virginia Commonwealth University.

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Submissions from 2016

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Integration of Attributes from Non-Linear Characterization of Cardiovascular Time-Series for Prediction of Defibrillation Outcomes, Sharad Shandilya, Michael C. Kurz, Kevin R. Ward, and Kayvan Najarian

Submissions from 2015

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Transcriptional network growing models using motif-based preferential attachment, Ahmed F. Abdelzaher, Ahmad F. Al-Musawi, Preetam Ghosh, Michael L. Mayo, and Edward J. Perkins

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Identifying influential nodes in a wound healing-related network of biological processes using mean first-passage time, Tomasz Jakub Arodz and Danail Bonchev

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miRegulome: a knowledge-base of miRNA regulomics and analysis, Debmalya Barh, Bhanu Kamapantula, Neha Jain, Joseph Nalluri, Antaripa Bhattacharya, Lucky Juneja, Neha Barve, Sandeep Tiwari, Anderson Miyoshi, Vasco Azevedo, Kenneth Blum, Anil Kumar, Artur Silva, and Preetam Ghosh

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Self-Organizing Feature Maps Identify Proteins Critical to Learning in a Mouse Model of Down Syndrome, Clara Higuera, Katheleen J. Gardiner, and Kryzysztof Cios

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Self-Organizing Feature Maps Identify Proteins Critical to Learning in a Mouse Model of Down Syndrome, Clara Higuera, Katheleen J. Gardiner, and Krzysztof J. Cios

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Self-Organizing Feature Maps Identify Proteins Critical to Learning in a Mouse Model of Down Syndrome, Clara Higuera, Kathleen J. Gardiner, and Kryzysztof Cios

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Enabling smartphone-based HD video chats by cooperative transmissions in CRNs, Tao Jing, Xuewei Cui, Wei Cheng, Shixiang Zhu, Yan Huo, and Xiuzhen Cheng

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Online auction-based relay selection for cooperative communication in CR networks, Tao Jing, Fan Zhang, Wei Cheng, Yan Huo, and Xiuzhen Cheng

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Use of a Green Familiar Faces Paradigm Improves P300-Speller Brain-Computer Interface Performance, Qi Li, Shuai Lu, Jian Li, and Ou Bai

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MapRepeat: an approach for effective assembly of repetitive regions in prokaryotic genomes, Diego CB Mariano, Felipe L. Pereira, Preetam Ghosh, Debmalya Barh, Henrique CP Figueiredo, Artur Silva, Rommel TJ Ramos, and Vasco AC Azevedo

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DISMIRA: Prioritization of disease candidates in miRNA-disease associations based on maximum weighted matching inference model and motif-based analysis, Joseph J. Nalluri, Bhanu K. Kamapantula, Debmalya Barh, Neha Jain, Antaripa Bhattacharya, Sintia Silva de Almeida, Rommel Thiago Juca Ramos, Artur Silva, Vasco Azevedo, and Preetam Ghosh

Submissions from 2014

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Virtual Track: Applications and Challenges of the RFID System on Roads, Wei Cheng, Shengling Wang, and Xiuzhen Cheng

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A simple contact mapping algorithm for identifying potential peptide mimetics in protein–protein interaction partners, Alex Krall, Jonathan Brunn, Spandana Kankanala, and Michael H. Peters

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Bioinformatics and Biomedical Informatics, Kayvan Najarian, Rachid Deriche, Mark A. Kon, and Nina S. T. Hirata

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Impact of HbA1c Measurement on Hospital Readmission Rates: Analysis of 70,000 Clinical Database Patient Records, Beata Strack, Jonathan P. DeShazo, Chris Gennings, Juan L. Olmo, Sebastian Ventura, Krzysztof J. Cios, and John N. Clore

Submissions from 2013

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Biomedical Informatics for Computer-Aided Decision Support Systems: A Survey, Ashwin Belle, Mark A. Kon, and Kayvan Najarian

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A Hierarchical Method for Removal of Baseline Drift from Biomedical Signals: Application in ECG Analysis, Yurong Luo, Rosalyn H. Hargraves, Ashwin Belle, Ou Bai, Xuguang Qi, Kevin R. Ward, Michael Paul Pfaffenberger, and Kayvan Najarian

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An Entropy-Based Automated Cell Nuclei Segmentation and Quantification: Application in Analysis of Wound Healing Process, Varun Oswal, Ashwin Belle, Robert Diegelmann, and Kayvan Najarian

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ENNET: inferring large gene regulatory networks from expression data using gradient boosting, Janusz Slawek and Tomasz Arodź

Submissions from 2012

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An Automated Optimal Engagement and Attention Detection System Using Electrocardiogram, Ashwin Belle, Rosalyn H. Hargraves, and Kayvan Najarian

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Non-linear dynamical signal characterization for prediction of defibrillation success through machine learning, Sharad Shandilya, Kevin R. Ward, Michael Kurz, and Kayvan Najarian

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Fracture Detection in Traumatic Pelvic CT Images, Jie Wu, Pavani Davuluri, Kevin R. Ward, Charles Cockrell, Rosalyn H. Hargraves, and Kayvan Najarian

Submissions from 2011

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A modified Stokes-Einstein equation for Aβ aggregation, Srisairam Achuthan, Bon Jae Chung, Preetam Ghosh, Vijayaraghavan Rangachari, and Ashwin Vaidya

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First-Passage Time Analysis of a One-Dimensional Diffusion-Reaction Model: Application to Protein Transport Along DNA, Michael L. Mayo, Edward J. Perkins, and Preetam Ghosh