Publications from the Department of Human and Molecular Genetics, Virginia Commonwealth University.

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Submissions from 2017

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Rare mutations and potentially damaging missense variants in genes encoding fibrillar collagens and proteins involved in their production are candidates for risk for preterm premature rupture of membranes, Bhavi P. Modi, Maria E. Teves, Laurel N. Pearson, Hardik I. Parikh, Piya Chaemsaithong, Nihar U. Sheth, Timothy P. York, Roberto Romero, and Jerome F. Strauss

Submissions from 2016

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RNAseq Analyses Identify Tumor Necrosis Factor-Mediated Inflammation as a Major Abnormality in ALS Spinal Cord, David G. Brohawn, Laura C. O'Brien, and James P. Bennett

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Sestrin2 is induced by glucose starvation via the unfolded protein response and protects cells from non-canonical necroptotic cell death, Boxiao Ding, Anita Parmigiani, Ajit S. Divakaruni, Kellie Archer, Anne N. Murphy, and Andrei V. Budanov

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Krüppel-Like Transcription Factor KLF1 Is Required for Optimal γ- and β-Globin Expression in Human Fetal Erythroblasts, Divya Vinjamur, Yousef N. Alhashem, Safa Mohamad, Parth Amin, David C. Williams Jr., and Joyce A. Lloyd

Submissions from 2015

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Evaluation of Methyl-Binding Domain Based Enrichment Approaches Revisited, Karolina A. Aberg, Linying Xie, Robin F. Chan, Min Zhao, Ashutosh K. Pandey, Gaurav Kumar, Shaunna L. Clark, and Edwin J. C. G. van den Oord

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Perceived Stress Levels, Chemotherapy, Radiation Treatment and Tumor Characteristics Are Associated with a Persistent Increased Frequency of Somatic Chromosomal Instability in Women Diagnosed with Breast Cancer: A One Year Longitudinal Study, Noran Aboalela, Debra E. Lyon, R. K. Elswick Jr., Debra Lynch Kelly, Jenni Brumelle, Harry D. Bear, and Colleen Jackson-Cook

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Perceived Stress Levels, Chemotherapy, Radiation Treatment and Tumor Characteristics Are Associated with a Persistent Increased Frequency of Somatic Chromosomal Instability in Women Diagnosed with Breast Cancer: A One Year Longitudinal Study, Noran Aboalela, Debra E. Lyon, R. K. Elswick Jr., Debra Lynch Kelly, Jenni Brumelle, Harry D. Bear, and Colleen Jackson-Cook

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Knockdown of CDK2AP1 in Primary Human Fibroblasts Induces p53 Dependent Senescence, Khaled N. Alsayegh, Venkat S. Gadepalli, Shilpa Iyer, and Raj R. Rao

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Knockdown of CDK2AP1 in Primary Human Fibroblasts Induces p53 Dependent Senescence, Khaled N. Alsayegh, Venkat S. Gadepalli, Shilpa Iyer, and Raj R. Rao

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Differential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads, Hung-I Harry Chen, Yuanhang Liu, Yi Zou, Zhao Lai, Devanand Sarkar, Yufei Huang, and Yidong Chen

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Genetic Risks to Nicotine Dependence Predict Negative Mood and Affect in Current Non-Smokers, Xiangning Chen, Steven H. Aggen, Jingchun Chen, Lingxi Li, Kenneth S. Kendler, Melissa Blank, and Thomas Eissenberg

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Comparison of Effects of p53 Null and Gain-of-Function Mutations on Salivary Tumors in MMTV-Hras Transgenic Mice, Dadi Jiang, Catherine I. Dumur, H. Davis Massey, Viswanathan Ramakrishnan, Mark A. Subler, and Jolene J. Windle

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Tumor-Specific Expression and Detection of a CEST Reporter Gene, Il Minn, Amnon Bar-Shir, Keerthi Yarlagadda, Jeff W. M. Bulte, Paul B. Fisher, Hao Wang, Assaf A. Gilad, and Martin G. Pomper

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Tumor-Specific Expression and Detection of a CEST Reporter Gene, Il Minn, Amnon Bar-Shir, Keerthi Yarlagadda, Jeff W. M. Bulte, Paul B. Fisher, Hao Wang, Assaf A. Gilad, and Martin G. Pomper

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Depletion of the chromatin remodeler CHD4 sensitizes AML blasts to genotoxic agents and reduces tumor formation, Justin Sperlazza, Mohamed Rahmani, Jason Beckta, Mandy Aust, Elisa Hawkins, Shou Zhen Wang, Sheng Zu Zhu, Shreya Podder, Catherine Dumur, Kellie Archer, Steven Grant, and Gordon D. Ginder

Submissions from 2014

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Dietary Regimens Modify Early Onset of Obesity in Mice Haploinsufficient for Rai1, Joseph T. Alaimo, Natalie H. Hahn, Sureni V. Mullegama, and Sarah H. Elsea

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Contrasting influences of Drosophila white/mini-white on ethanol sensitivity in two different behavioral assays, Robin F. Chan, Carol Atkinson Lewellyn, Jacqueline M. DeLoyht, Kristyn Sennett, Scarlett Coffman, Matthew Hewitt, Jill C. Bettinger, John M. Warrick, and Mike Grotewiel

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A placebo-controlled, double-blind, randomized, multicenter study to assess the effects of dronedarone 400 mg twice daily for 12 weeks on atrial fibrillation burden in subjects with permanent pacemakers, Michael D. Ezekowitz; Kenneth Ellenbogen , M.D.; John P. DiMarco; Karoly Kaszala; Alexander Boddy; Gregory Geba P.; and Andrew Koren

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Correction: The role of tumor-associated macrophages in tumor vascularization, Chunqing Guo, Annicole Buranych, Devanand Sarkar, Paul B. Fisher, and Xiang-Yang Wang

Submissions from 2013

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A Twin Study of Early-Childhood Asthma in Puerto Ricans, Supinda Bunyavanich, Judy L. Silberg, Jessica Lasky-Su, Nathan A. Gillespie, Nancy E. Lange, Glorisa Canino, and Juan C. Celedon

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The Krüppel-like factor 2 and Krüppel-like factor 4 genes interact to maintain endothelial integrity in mouse embryonic vasculogenesis, Aditi R. Chiplunkar, Benjamin C. Curtis, Gabriel L. Eades, Megan S. Kane, Sean J. Fox, Jack L. Haar, and Joyce A. Lloyd

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Krüppel-Like Factor 2 Is Required for Normal Mouse Cardiac Development, Aditi R. Chiplunkar, Tina K. Lung, Yousef Alhashem, Benjamin A. Koppenhaver, Fadi N. Salloum, Rakesh C. Kukreja, Jack L. Haar, and Joyce A. Lloyd

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The role of tumor-associated macrophages in tumor vascularization, Chunqing Guo, Annicole Buranych, Devanand Sarkar, Paul B. Fisher, and Xiang-Yang Wang

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Targeted Apoptotic Effects of Thymoquinone and Tamoxifen on XIAP Mediated Akt Regulation in Breast Cancer, Shashi Rajput, B. N. P. Kumar, Siddik Sarkar, Subhasis Das, Belal Azab, Prasanna K. Santhekadur, Swadesh K. Das, Luni Emdad, Devanand Sarkar, Paul B. Fisher, and Mahitosh Mandal

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Identification of Genes Potentially Regulated by Human Polynucleotide Phosphorylase (hPNPaseold-35) Using Melanoma as a Model, Upneet K. Sokhi, Manny D. Bacolod, Santanu Dasgupta, Luni Emdad, and Swadesh K. Das