Submissions from 2017
Bacterial protein meta-interactomes predict cross-species interactions and protein function, J. Harry Caufield, Christopher Wimble, Semarjit Shary, Stefan Wuchty, and Peter Uetz
Submissions from 2016
Network Topology Analysis of Post-Mortem Brain Microarrays Identifies More Alzheimer’s Related Genes and MicroRNAs and Points to Novel Routes for Fighting with the Disease, Sreedevi Chandrasekaran and Danail Bonchev
The interactome of Streptococcus pneumoniae and its bacteriophages show highly specific patterns of interactions among bacteria and their phages, Rachelle Mariano, Stefan Wuchty, Maria G. Vizoso-Pinto, Roman Häuser, and Peter Uetz
Submissions from 2015
The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies, J. Paul Brooks, David J. Edwards, Michael D. Harwich, Maria C. Rivera, Jennifer M. Fettweis, Myrna G. Serrano, Robert Reris, Nihar U. Sheth, Bernice Huang, Phillipe Girerd, Vaginal Microbiome Consortium, Jerome F. Strauss III, Kimberly K. Jefferson, and Gregory A. Buck
Protein Complexes in Bacteria, J. Harry Caufield, Marco A. Abreu, Christopher Wimble, and Peter Uetz
Protein Complexes in Bacteria, J. Harry Caufield, Marco Abreu, Christopher Wimble, and Peter Uetz
Highly Iterated Palindromic Sequences (HIPs) and Their Relationship to DNA Methyltransferases, Jeff Elhai
Applications to Aging Networks, Christopher Wimble and Tarynn M. Witten
Submissions from 2014
Arabidopsis Transcriptome Analysis Reveals Key Roles of Melatonin in Plant Defense Systems, Sarah Weeda, Na Zhang, Xiaolei Zhao, Grace Ndip, Yangdong Guo, Gregory A. Buck, Conggui Fu, and Shuxin Ren
AGROBEST: an efficient Agrobacterium-mediated transient expression method for versatile gene function analyses in Arabidopsis seedlings, Hang-Yi Wu, Kun-Hsiang Liu, Yi-Chieh Wang, Jing-Fen Wu, Wan-Ling Chiu, Chao-Ying Chen, Shu-Hsing Wu, Jen Sheen, and Erh-Min Lai
Submissions from 2013
Endosymbiosis in trypanosomatids: the genomic cooperation between bacterium and host in the synthesis of essential amino acids is heavily influenced by multiple horizontal gene transfers, João M.P. Alves, Cecilia C. Klein, Flávia Maia da Silva, André G. Costa-Martins, Myrna G. Serrano, Gregory A. Buck, Ana Tereza R. Vasconcelos, Marie-France Sagot, Marta M.G. Teixeira, Maria Cristina M. Motta, and Erney P. Camargo
Natural Plasmodium infection in monkeys in the state of Rondônia (Brazilian Western Amazon), Maisa S. Araújo, Mariluce R. Messias, Marivaldo R . Figueiró, Luiz Herman S. Gil, Christian M. Probst, Newton M. Vidal, Tony H. Katsuragawa, Luiz H. Pereira da Silva, and Luiz S. Ozaki
The E. coli Effector Protein NleF Is a Caspase Inhibitor, Sonja Blasche, Mario Mortl, Holger Steuber, Gabriella Siszler, Shahista Nisa, Frank Schwarz, Inna Lavrik, Thomas M. A. Gronewold, Klaus Maskos, Michael S. Donnenberg, Dirk Ullmann, Peter Uetz, and Manfred Kogl
Predicting Dyspnea Inducers by Molecular Topology, María Gálvez-Llompart,; Jorge Gálvez; Ramón García-Domenech; and Lemont B. Kier
A core microbiome associated with the peritoneal tumors of pseudomyxoma peritonei, Jeremy J. Gilreath, Cristina Semino-Mora, Christopher J. Friedline, Hui Liu, Kip L. Bodi, Thomas J. McAvoy, Jennifer Francis, Carol Nieroda, Armando Sardi, Andre Dubois, David W. Lazinski, Andrew Camilli, Traci L. Testerman, and D Scott Merrell
Biosynthesis of Vitamins and Cofactors in Bacterium-Harbouring Trypanosomatids Depends on the Symbiotic Association as Revealed by Genomic Analyses, Cecilia C. Klein, Joao M. P. Alves, Myrna G. Serrano, Gregory A. Buck, Ana T. R. Vasconcelos, Marie-France Sagot, Marta M. G. Teixeira, Emey P. Camargo, and Maria C. M. Motta
Global Taxonomic Diversity of Living Reptiles, Daniel Pincheira-Donoso, Aaron M. Bauer, Shai Meiri, and Peter Uetz
Whole Brain and Brain Regional Coexpression Network Interactions Associated with Predisposition to Alcohol Consumption, Lauren A. Vanderlinden, Laura M. Saba, Katerina Kechris, Michael F. Miles, Paula L. Hoffman, and Boris Tabakoff
Submissions from 2012
Detection of horizontal transfer of individual genes by anomalous oligomer frequencies, Jeff Elhai, Hailan Liu, and Arnaud Taton
RsfA (YbeB) Proteins Are Conserved Ribosomal Silencing Factors, Roman Hauser, Markus Pech, Jaroslaw Kijek, Hiroshi Yamamoto, Bjrn Titz, Florian Naeve, Andrey Tovchigrechko, Kaori Yamamoto, Witold Szaflarski, Nono Takeuchi, Thorsten Stellberger, Markus E. Diefenbacher, Knud H. Nierhaus, and Peter Uetz
Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities, John Martin, Sean Sykes, Sarah Young, Karthik Kota, Riva Sanka, Nihar U. Sheth, Joshua Orvis, Erica Sodergren, Zhengyuan Wang, George M. Weinstock, and Makedonka Mitreva
A comparison of two distinct murine macrophage gene expression profiles in response to Leishmania amazonensis infection, Christian M. Probst, Rodrigo A. Silva, Juliana P.B. Menezes, Tais F. Almeida, Ivana N. Gomes, Andréia C. Dallabona, Luiz S. Ozaki, Gregory A. Buck, Daniel P. Pavoni, Marco A. Krieger, and Patrícia S.T. Veras
Genome-Wide Association Study Heterogeneous Cohort Homogenization via Subject Weight Knock-Down, Andre X. C. N. Valente, Joseph Zischkau, Joo H. Shin, Yuan Gao, and Abhijit Sarkar
Submissions from 2011
Water Chreodes and the Mechanisms of Ligand Diffusion, General Anesthesia, and Sleep, Lemont B. Kier
Evolution combined with genomic study elucidates genetic bases of isobutanol tolerance in Escherichia coli, Jeremy J. Minty, Ann A. Lesnefsky, Fengming Lin, Yu Chen, Ted A. Zaroff, Artur B. Veloso, Bin Xie, Catie A. McConnell, Rebecca J. Ward, Donald R. Schwartz, Jean-Marie Rouillard, Yuan Gao, Erdogan Gulari, and Xiaoxia Nina Lin